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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932410.1_cds_XP_016478925.1_70520
CDS Infomation

[gene=LOC107800290] [db_xref=GeneID:107800290] [protein=short integuments 2, mitochondrial-like isoform X2] [protein_id=XP_016478925.1] [location=complement(join(179874..180128,180308..180525,181249..181345,181517..181587,181686..181827,182671..182748,183409..183513,183641..183796))] [gbkey=CDS]
Sequence

ATGGGGGCAGTGAGAAAAGGATGGTTGGGGCAAATGGGTTTCAACAAAGGTGGAGGAAAC
ATCAATTGGTTCCCGGGGCACATGGCTGCAGCTACCCGTGCCATTCGCCAACGCCTCAAA
CTCTCTGACCTTGTCATTGAAGTCCGTGATGCCCGTATACCATTGTCTTCGGCGAACGAA
GACTTGCAGCCAATGCTTTCTGGAAAAAGGCGAGTCATTGCCCTCAATAAGCAAGATTTG
GCCAACCGCAACCTCATGCATGGGTGGATTAGTTATTTTAATTCACGTAAACAAGAGTGT
CTCCCAATAAATGCACACAGTAGAAGTTCTGTACAAAAGCTTCTTGATCTGGTCGAGTTC
AAACTGAAGGAGGTTATGACAAGGGAACCTACTCTTCTTGTCATGGTGTTGGGTGTTCCA
AATGTTGGCAAATCAGCTTTAATCAACTCCATACATCAAATTGCATTATCTCGATTTCCA
GTGCAGGAGAAGATGAAGAAGGCTAGAGTGGGACCTTTGCCTGGTGTTACTCAAGATATT
GCTGGATTCAAGATTGCACATCGACCGAGTGTATATTTGCTGGACACTCCAGGAGTGTTG
GTTCCAAGTATCCCAGATATAGAAACCGGGCTAAAGCTAGCTCTTGCAGGGTCCGTGAAA
GATTCTGTGGTGGGTGAAGAGCGAATTGCTCAATACCTATTAGCAGTGTTAAACACTCGA
GGAACTCCTCTTCATTGGAAGCACTTGGTTAGCAGGGAAACTGAGGACCTTCATCTTGAG
TTGGACAAGAAACCTGAATCTAATATCAAATATCTTCAAAATAAGAGCAAGAAGCCCATA
AACAAATCTGATGTCTACCGTGTTCAGGATATGGTTAGTGAAGTCCAACGCACACTTTAC
ATCACACACTCGGAGTTCAATGGTAGTTTGGAAGATGAAAATGACCTAGAAACTCTAATA
GACCACCAGTTTGAAGCATTGCAGAAGGCTCTAAAGATACCTCATAAAGCTTCAGAGGCT
CGGATAATGGTATCAAAGAAATTCCTTACTTTATTTAGAACAGGGAAACTAGGTTCTTTT
ATCCTGGACGACGTTCCTGACGCATCTGACTCTGTATCTTGA

Peptide Sequence

PEP ID

XP_016478925.1
PEP Infomation

PREDICTED: short integuments 2, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MGAVRKGWLGQMGFNKGGGNINWFPGHMAAATRAIRQRLKLSDLVIEVRDARIPLSSANE
DLQPMLSGKRRVIALNKQDLANRNLMHGWISYFNSRKQECLPINAHSRSSVQKLLDLVEF
KLKEVMTREPTLLVMVLGVPNVGKSALINSIHQIALSRFPVQEKMKKARVGPLPGVTQDI
AGFKIAHRPSVYLLDTPGVLVPSIPDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTR
GTPLHWKHLVSRETEDLHLELDKKPESNIKYLQNKSKKPINKSDVYRVQDMVSEVQRTLY
ITHSEFNGSLEDENDLETLIDHQFEALQKALKIPHKASEARIMVSKKFLTLFRTGKLGSF
ILDDVPDASDSVS

Transcript Sequence

Gene sequence data has not been registered.